Our Approach

Next-Gen Drug Discovery

Our Approach

ToRFLEx‘s versatility enables us to utilize the best strategy to target disease-modulating proteins

We engineer cells to discover compounds that work through complex mechanisms. Using a plug-and-play functional selection approach, once compounds that function via the mechanism we seek are found, the engineered cells can survive. Otherwise, those cells are engineered to die.

For any given target, we start by hypothesizing an ideal drug mechanism of action and then configure the ToRFLEx platform to functionally select for compounds that achieve this mechanism. We are particularly focused on two main strategies: protein-protein interaction inhibitors and proximity inducers to achieve targeted protein degradation.

ToRFLEx can be further engineered to achieve even more complex selection requirements, such as discovering compounds that can selectively modulate specific paralogs, proteins in a particular conformation, or specific members of a multi-subunit protein complex.

We then select the best compound library for a ToRFLEx screen based on a particular target and ideal mechanism. ToRFLEx can discover functional compounds from diverse small molecule libraries using HTS by selecting cell permeable and functional compounds from a first pass screen.

To expand the chemical search space into the billions, we’ve also engineered various genetically encoded libraries of short peptides and biologics that are ribosomally synthesized inside the same engineered cells performing the mechanistic selection. This approach allows us to simultaneously produce a vast library of intracellular compounds and screen them in the same cell, rapidly discovering rare functional molecules. These tool compounds can directly be used in relevant cell models and unlock medicinal chemistry campaigns. 

This empirical, diverse, and unbiased screening of compounds has consistently uncovered novel functional allosteric pockets and generated valuable tool compounds for historically elusive & high value targets. 

Our Technology

An empirical drug discovery platform to discover protein interaction modulators

Using genetically engineered circuits, the ToRFLEx platform relies on intracellular drug selection. This allows for the unbiased discovery of compounds that can engage target proteins in either competitive or allosteric ways to achieve a desired mechanism of action. This intracellular approach bypasses many bottlenecks and limitations that exist with canonical in-vitro screening assays or computational approaches.
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01

Cell survival based drug discovery

ToRFLEx works by genetically engineering cells and linking cell survival to the desired drug mechanistic output. Cells survive when the desired drug mechanism takes place in a target-specific manner.
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02

Bypass in-vitro assay limitations

By genetically encoding proteins into our cells we can access full-length protein constructs that would otherwise fail to be faithfully recapitulated in biochemical assays.
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No need for structural Information

We can use proteins in ToRFLEx without existing structural information. This is particularly important when working with proteins that contain many unstructured domains that could be pharmacologically engaged to regulate the proteins’ function.
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Physiologically relevant intracellular context

Genetically encoding the target proteins for intracellular expression allows these proteins to be expressed as full length constructs, present in a native intracellular milieu, with physiological redox states, secondary metabolites and any needed chaperones and binding partners. This ensures that the proteins are free to sample all their native conformations.
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ToRFLEx is plug and play

The vast majority of intracellular proteins can be integrated for screening within ToRFLEx. Our proprietary genetic engineering allows us to uncoupled targets from their natural functions and only their desired modulation is tied to our survival-based hit compound selection.
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Applications

ToRFLEx is a versatile platform across challenging targets

The flexibility of our engineered circuitry allows us to “program” various selections for challenging targets.

 

These have broad application across targets in various indications.

 

We are starting with oncology.

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Oncology

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Immunology

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Neurodegeneration

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Rare Diseases

We can apply ToRFLEx to discover drugs that work through various mechanisms of action.

Our two main areas of focus are protein-protein interaction disruption (using ToRPPIDO) and targeted protein degradation (using ToRNeDO). Explore more about these strategies below and how they are implemented to target different cellular pathways.
ToRPPIDO
ToRPPIDO discovers compounds that can functionally disrupt a Protein-Protein Interaction.
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ToRNeDO
ToRNeDO discovers compounds that bring an E3 ubiquitin ligase and a neosubstrate of interest together to enable Targeted Protein Degradation.
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